previous  nextX57522.G6.2376 (TAP1) -> ENSG00000168394@66_37.G6.32813432
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Tract / statusG6 / cMNR -> Tx!   MNR_ensembl
First published byKLOOR2005B PubMed
Accession numberX57522 gi:36060
Gene (chromosome)TAP1  ( 6 )   SOURCE
EnsemblENSG00000168394   SMART   GermOnline   GeneCards
NCBIEntrez Gene 6890   Unigene Hs.352018 (SAGE)   GeneCards 6890 

Mutation rate [%] Colon Endometrium Stomach Urothel
Cancer Adenoma Culture Cancer Cancer Cancer
8.9
(n=56)

Genomic sequence
BLAST WWW
BLAST local
CTGACGGTCC GATGTCTTTC CTCAGGTGGA GCAGCTCCTG TACGAAAGCC CTGAGCGGTA CTCCCGCTCA GTGCTTCTCA TCACCCAGCA CCTCAGCCTG GTGGAGCAGG CTGACCACAT CCTCTTTCTG GAAGGAGGCG CTATCCGGGA GGGGGGAACC CACCAGCAGC TCATGGAGAA AAAGGGGTGC TACTGGGCCA TGGTGCAGGC TCCTGCAGAT GCTCCAGAAT GAAAGCCTTC TCAGACCTGC GCACTCCATC TCCCTCCCTT TTCTTCTCTC TGTGGTGGAG AACCACAGCT GCAGAG
MNR, transcribed, primer.
PCR system1sense gTACTCCCgCTCAgTgCTTC, antisense AgAAggCTTTCATTCTggAgC, product length 184, Ta 59.
Transcript sequenceCCTGGATGCA AACAGCCAGT TACAGGTGGA GCAGCTCCTG TACGAAAGCC CTGAGCGGTA CTCCCGCTCA GTGCTTCTCA TCACCCAGCA CCTCAGCCTG GTGGAGCAGG CTGACCACAT CCTCTTTCTG GAAGGAGGCG CTATCCGGGA GGGGGGAACC CACCAGCAGC TCATGGAGAA AAAGGGGTGC TACTGGGCCA TGGTGCAGGC TCCTGCAGAT GCTCCAGAAT GAAAGCCTTC TCAGACCTGC GCACTCCATC TCCCTCCCTT TTCTTCTCTC TGTGGTGGAG AACCACAGCT GCAGAG
MNR, homologue to genomic MNR region.
Transcripts#ENSTtranscribedtranslatedATGSTOPlengthMNRENSPlocate
1ENST0000048633210025422091--
2ENST0000035425811163259029592508ENSP00000346206show
3ENST00000487296001031--
4ENST0000042514811170181421821732ENSP00000401919show
Shown are all Ensembl transcripts (ENSTs) currently annotated for the respective Ensembl gene (ENSG), Ensembl rel. 66_37.
final status: cMNR (cMNR) .

Show consequences concerning peptide sequence(s) of frameshift alleles m2/m1/p1/p2.


1 primers derived from KLOOR2005B.

SelTarbase version latest, release 201307, last updated 20130701.

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