previous  nextU17496.C6.54 (PSMB8) -> ENSG00000204264@66_37.C6.32811743
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Tract / statusC6 / cMNR -> Tx!   MNR_ensembl
First published byKLOOR2005B PubMed
Accession numberU17496 gi:596139
Gene (chromosome)PSMB8  ( 6 )   SOURCE
alt. namesLMP7
EnsemblENSG00000204264   SMART   GermOnline   GeneCards
NCBIEntrez Gene 5696   Unigene Hs.180062 (SAGE)   GeneCards 5696 

Mutation rate [%] Colon Endometrium Stomach Urothel
Cancer Adenoma Culture Cancer Cancer Cancer
2.0
(n=50)

Genomic sequence
BLAST WWW
BLAST local
ACTGTCCTTT TCTCGGAAAA GGCAGGGGGA TGTGGAAAAG AGTCTTGTTC CCTCCCCTTC GATCTGTGGC TTTCGCTTTC ACTTCCTCCT CCGAGAGCGG ACAGATCTCT GGGTGCTGGG CGGTCATGGC GCTACTAGAT GTATGCGGAG CCCCCCGAGG GCAGCGGCCG GAATCGGCTC TCCCGGTTGC GGGAAGCGGG CGTCGCTCGG ACCCAGGACA CTACAGTTTC TCTATGCGAT CTCCAGAGCT CGCTTTACCC CGGGGAATGC AGGTCGGGGC AGTAGGGAAG CCCCTAGGGA TGCAGG
MNR, transcribed, primer.
PCR system1sense gAgAgCggACAgATCTCTgg, antisense gAAACTgTAgTgTCCTgggTCC, product length 138, Ta 59.
Transcript sequenceTTCCTCCTCC GAGAGCGGAC AGATCTCTGG GTGCTGGGCG GTCATGGCGC TACTAGATGT ATGCGGAGCC CCCCGAGGGC AGCGGCCGGA ATCGGCTCTC CCGGTTGCGG GAAGCGGGCG TCGCTCGGAC CCAGGACACT ACAGTTTCTC TATGCGATCT CCAGAGCTCG CTTTACCCCG GGGAATGCAG CCCACAGAAT TCTTCCAGTC CCTGGGTGGG GACGGAGAAA GGAACGTTCA GATTGAGATG GCCCATGGCA CCACCACGCT CGCCTTCAAG TTCCAGCATG GAGTGATTGC AGCAGT
MNR, homologue to genomic MNR region.
Transcripts#ENSTtranscribedtranslatedATGSTOPlengthMNRENSPlocate
1ENST0000049061300835--
2ENST000003953391125784102550ENSP00000378748show
3ENST000003748821152883112477ENSP00000364016show
4ENST000003748810029111101351ENSP00000364015show
5ENST00000484003001153--
Shown are all Ensembl transcripts (ENSTs) currently annotated for the respective Ensembl gene (ENSG), Ensembl rel. 66_37.
final status: cMNR (cMNR) .

Show consequences concerning peptide sequence(s) of frameshift alleles m2/m1/p1/p2.


1 primers derived from KLOOR2005B.

SelTarbase version latest, release 201307, last updated 20130701.

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