previous  nextNT_011568@GI@27501314.T19.3019048 (SLC9A7) -> ENSG00000065923@66_37.A19.46505054
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Tract / statusT19, reported length 18 / iMNR   MNR_ensembl
First published byYOUNG1995 PubMed
Accession numberNT_011568 gi:27501314
Gene (chromosome)SLC9A7  ( X )   SOURCE
alt. namesAPdelta3;NHE7
EnsemblENSG00000065923   SMART   GermOnline   GeneCards
NCBIEntrez Gene 84679   Unigene Hs.496057 (SAGE)   GeneCards 84679 

Mutation rate [%] Colon Endometrium Stomach Urothel
Cancer Adenoma Culture Cancer Cancer Cancer
87.2100.0100.0
(n=47)(n=10)(n=23)

Genomic sequence
BLAST WWW
BLAST local
GCCCACTCCA TATCCCCAGA ATCAGACAGT GAGGCCCAGC AATCTGCACT TTAACAAGCC CAATGGGCAA TTCTGATGTA ACCTAAACGG TGAAAATTAT GAGTTTAGAT ACAATTCTCC TTTCCAACCT CACCTTCTTT CCCCACTCCC TTTTTTTTTT TTTTTTTTTG CATATCATTC CTTTCTTATA CTGATTTGGA AAAAAGATTT AGTACAGTTA TGCTCAAAAT GAGTACTGGG CCCATGTGGC ATGGCCAAGT AACTAAAACG TGATTCAGAA AACAGGCAGT GAAAGACACA CTTGGACGTG ATCAAGAGG
MNR, transcribed, primer.
PCR system1sense gAggCCCAgCAATCTgCACT, antisense AAATCAgTATAAgAAAggAA, product length 167, Ta 50.
Transcripts#ENSTtranscribedtranslatedATGSTOPlengthMNRENSPlocate
1ENST00000328306002722053838ENSP00000330320show
2ENST0000046493300705--
3ENST0000049189400502--
4ENST0000048957400415--
Shown are all Ensembl transcripts (ENSTs) currently annotated for the respective Ensembl gene (ENSG), Ensembl rel. 66_37.
final status: unclear (iMNR) .

Culture data cell line   mutated   allele(s)  reference
Colo60H 1 m6 INTERN9999
DLD1 1 - SHIBATA1994
HCT116 1 m10m8 INTERN9999
HCT15 1 - SHIBATA1994
KM12 1 m7 INTERN9999
LoVo 1 m9* SHIBATA1994 / *INTERN9999
LS174T 1 - SHIBATA1994
LS180 1 - SHIBATA1994
RKO 1 m7 INTERN9999
SW48 1 m6 INTERN9999

1 primers derived from IONOV1993.

SelTarbase version latest, release 201307, last updated 20130701.

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