previous  nextAF195657.A9.1861 (MLH3) -> ENSG00000119684@66_37.A9.75514604
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Tract / statusA9 / cMNR -> Tx!   MNR_ensembl
First published byLOUKOLA2000 PubMed
Accession numberAF195657 gi:6689927
Gene (chromosome)MLH3  ( 14 )   SOURCE
EnsemblENSG00000119684   SMART   GermOnline   GeneCards
NCBIEntrez Gene 27030   Unigene Hs.436650 (SAGE)   GeneCards 27030 

Mutation rate [%] Colon Endometrium Stomach Urothel
Cancer Adenoma Culture Cancer Cancer Cancer
15.97.90.0
(n=189)(n=38)(n=52)

Genomic sequence
BLAST WWW
BLAST local
ACTGTTAATG GCATGGCTGC CAACATCTTG AAAAATAATA GAATTCAGAA TCAACCAAAG AGATTTAAAG ATGCTACTGA AGTGGGATGC CAGCCTCTGC CTTTTGCAAC AACATTATGG GGAGTACATA GTGCTCAGAC AGAGAAAGAG AAAAAAAAAG AATCTAGCAA TTGTGGAAGA AGAAATGTTT TTAGTTATGG GCGAGTTAAA TTATGTTCCA CTGGCTTTAT AACTCATGTA GTACAAAATG AAAAAACTAA ATCAACTGAA ACAGAACATT CATTTAAAAA TTATGTTAGA CCTGGTCCC
MNR, transcribed, primer.
PCR systemsense ATgCCAgCCTCTgCCTTT, antisense TCgCCCATAACTAAAAACATTTC, product length 118, Ta 59.
Transcript sequenceACTGTTAATG GCATGGCTGC CAACATCTTG AAAAATAATA GAATTCAGAA TCAACCAAAG AGATTTAAAG ATGCTACTGA AGTGGGATGC CAGCCTCTGC CTTTTGCAAC AACATTATGG GGAGTACATA GTGCTCAGAC AGAGAAAGAG AAAAAAAAAG AATCTAGCAA TTGTGGAAGA AGAAATGTTT TTAGTTATGG GCGAGTTAAA TTATGTTCCA CTGGCTTTAT AACTCATGTA GTACAAAATG AAAAAACTAA ATCAACTGAA ACAGAACATT CATTTAAAAA TTATGTTAGA CCTGGTCCC
MNR, homologue to genomic MNR region.
Transcripts#ENSTtranscribedtranslatedATGSTOPlengthMNRENSPlocate
1ENST00000554697001376825ENSP00000451055show
2ENST0000023866211217450752331963ENSP00000238662show
3ENST0000055371300314372118ENSP00000451130show
4ENST0000055541500700--
5ENST0000055625711107393542291853ENSP00000451540show
6ENST000005567401137439944911783ENSP00000452316show
7ENST00000556453003327635ENSP00000452136show
8ENST000005551440026021120ENSP00000450647show
9ENST0000055549900527--
10ENST0000055567100931--
11ENST0000055326300130619616ENSP00000451192show
12ENST0000055764800265586583ENSP00000451095show
13ENST0000035577411217457978961963ENSP00000348020show
14ENST00000380968103379455578721963ENSP00000370355show
15ENST000005449850015981119ENSP00000441371show
Shown are all Ensembl transcripts (ENSTs) currently annotated for the respective Ensembl gene (ENSG), Ensembl rel. 66_37.
final status: cMNR (cMNR) .

Show consequences concerning peptide sequence(s) of frameshift alleles m2/m1/p1/p2.


SelTarbase version latest, release 201307, last updated 20130701.

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