| Tract / status | T5 / cMNR -> Tx! MNR_ensembl |
| First published by | BADER1999 |
| Accession number | AF072250 gi:3800808 |
| Gene (chromosome) | MBD4 ( 3 ) SOURCE |
| alt. names | MED1 |
| Ensembl | ENSG00000129071 SMART GermOnline GeneCards |
| NCBI | Entrez Gene 8930 Unigene Hs.35947 (SAGE) GeneCards 8930 |
| Mutation rate [%] | Colon | Endometrium | Stomach | Urothel | ||
| Cancer | Adenoma | Culture | Cancer | Cancer | Cancer | |
| 0.0 | 0.0 | |||||
| (n=46) | (n=51) | |||||
| Genomic sequence - BLAST | GTGACCAGTG AAGAAAACAG CCTTGTAAAA AAAAAAGAAA GATCATTGAG TTCAGGATCA AATTTTTGTT CTGAACAAAA AACTTCTGGC ATCATAAACA AATTTTGTTC AGCCAAAGAC TCAGAACACA ACGAGAAGTA TGAGGATACC TTTTTAGAAT CTGAAGAAAT CGGAACAAAA GTAGAAGTTG TGGAAAGGAA AGAACATTTG CATACTGACA TTTTAAAACG TGGCTCTGAA ATGGACAACA ACTGCTCACC AACCAGGAAA GACTTCACTG GTGAGAAAAT ATTTCAAGGT ATCCA | |||||||||
| MNR, transcribed, primer. | ||||||||||
| Transcript sequence | GTGACCAGTG AAGAAAACAG CCTTGTAAAA AAAAAAGAAA GATCATTGAG TTCAGGATCA AATTTTTGTT CTGAACAAAA AACTTCTGGC ATCATAAACA AATTTTGTTC AGCCAAAGAC TCAGAACACA ACGAGAAGTA TGAGGATACC TTTTTAGAAT CTGAAGAAAT CGGAACAAAA GTAGAAGTTG TGGAAAGGAA AGAACATTTG CATACTGACA TTTTAAAACG TGGCTCTGAA ATGGACAACA ACTGCTCACC AACCAGGAAA GACTTCACTG GTGAGAAAAT ATTTCAAGAA GATAC | |||||||||
| MNR, homologue to genomic MNR region. | ||||||||||
| Transcripts | # | ENST | transcribed | translated | ATG | STOP | length | MNR | ENSP | locate |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | ENST00000249910 | 1 | 1 | 177 | 1920 | 2470 | 1230 | ENSP00000249910 | show | |
| 2 | ENST00000429544 | 1 | 1 | 177 | 1902 | 2452 | 1230 | ENSP00000394080 | show | |
| 3 | ENST00000393278 | 0 | 0 | 177 | 966 | 1516 | ENSP00000376959 | show | ||
| Shown are all Ensembl transcripts (ENSTs) currently annotated for the respective Ensembl gene (ENSG), Ensembl rel. 57_37b. | ||||||||||
| final status: cMNR (cMNR) . | ||||||||||
Show consequences concerning peptide sequence(s) of frameshift alleles m2/m1/p1/p2.
SelTarbase version latest, release 201006, last updated 20100601.