previous  nextAB073779.C6.218 (TAP2) -> ENSG00000204267@66_37.C6.32805788
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Tract / statusC6 / cMNR -> Tx!   MNR_ensembl
First published byKLOOR2005B PubMed
Accession numberAB073779 gi:16610227
Gene (chromosome)TAP2  ( 6 )   SOURCE
EnsemblENSG00000204267   SMART   GermOnline   GeneCards
NCBIEntrez Gene 6891   Unigene Hs.502 (SAGE)   GeneCards 6891 

Mutation rate [%] Colon Endometrium Stomach Urothel
Cancer Adenoma Culture Cancer Cancer Cancer
7.3
(n=55)

Genomic sequence
BLAST WWW
BLAST local
TTCAGGGCCC TCTGGGGACT TTGCTTCCTC AAGGGCTGCC AGGACTATGG CTGGAGGGGA CCCTGCGGCT GGGAGGGCTG TGGGGGCTGC TAAAGCTAAG AGGGCTGCTG GGATTTGTGG GGACACTGCT GCTCCCGCTC TGTCTGGCCA CCCCCCTGAC TGTCTCCCTG AGAGCCCTGG TCGCGGGGGC CTCACGTGCT CCCCCAGCCA GAGTCGCTTC AGCCCCTTGG AGCTGGCTGC TGGTGGGGTA CGGGGCTGCG GGGCTCAGCT GGTCACTGTG GGCTGTTCTG AGCCCTCCTG GAGCCC
MNR, transcribed, primer.
PCR system1sense TACTgTggCTgCTTCAggg, antisense AgggAgACAgTCAggggg, product length -11, Ta 59.
Transcript sequenceTTCAGGGCCC TCTGGGGACT TTGCTTCCTC AAGGGCTGCC AGGACTATGG CTGGAGGGGA CCCTGCGGCT GGGAGGGCTG TGGGGGCTGC TAAAACTAAG AGGGCTGCTG GGATTTGTGG GGACACTGCT GCTCCCGCTC TGTCTGGCCA CCCCCCTGAC TGTCTCCCTG AGAGCCCTGG TCGCGGGGGC CTCACGTGCT CCCCCAGCCA GAGTCGCTTC AGCCCCTTGG AGCTGGCTGC TGGTGGGGTA CGGGGCTGCG GGGCTCAGCT GGTCACTGTG GGCTGTTCTG AGCCCTCCTG GAGCCC
MNR, homologue to genomic MNR region.
Transcripts#ENSTtranscribedtranslatedATGSTOPlengthMNRENSPlocate
1ENST00000374899118020422497297ENSP00000364034show
2ENST000003748971113321945684350ENSP00000364032show
3ENST0000046410000849--
4ENST0000048570100274--
5ENST000005569341117524852705392ENSP00000451533show
Shown are all Ensembl transcripts (ENSTs) currently annotated for the respective Ensembl gene (ENSG), Ensembl rel. 66_37.
final status: cMNR (cMNR) .

Show consequences concerning peptide sequence(s) of frameshift alleles m2/m1/p1/p2.


1 primers derived from KLOOR2005B.

SelTarbase version latest, release 201307, last updated 20130701.

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