previous  nextAB021288.C5.285 (B2M) -> ENSG00000166710@66_37.C5.45007825
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Tract / statusC5 / cMNR -> Tx!   MNR_ensembl
First published byBICKNELL1994 PubMed
Accession numberAB021288 gi:4038732
Gene (chromosome)B2M  ( 15 )   SOURCE
EnsemblENSG00000166710   SMART   GermOnline   GeneCards
NCBIEntrez Gene 567   Unigene Hs.534255 (SAGE)   GeneCards 567 

Mutation rate [%] Colon Endometrium Stomach Urothel
Cancer Adenoma Culture Cancer Cancer Cancer
12.40.013.5
(n=202)(n=10)(n=52)

Genomic sequence
BLAST WWW
BLAST local
ATTTCCTGAA TTGCTATGTG TCTGGGTTTC ATCCATCCGA CATTGAAGTT GACTTACTGA AGAATGGAGA GAGAATTGAA AAAGTGGAGC ATTCAGACTT GTCTTTCAGC AAGGACTGGT CTTTCTATCT CTTGTACTAC ACTGAATTCA CCCCCACTGA AAAAGATGAG TATGCCTGCC GTGTGAACCA TGTGACTTTG TCACAGCCCA AGATAGTTAA GTGGGGTAAG TCTTACATTC TTTTGTAAGC TGCTGAAAGT TGTGTATGAG TAGTCATATC ATAAAGCTGC TTTGATATAA AAAAG
MNR, transcribed, primer.
Transcript sequenceATTTCCTGAA TTGCTATGTG TCTGGGTTTC ATCCATCCGA CATTGAAGTT GACTTACTGA AGAATGGAGA GAGAATTGAA AAAGTGGAGC ATTCAGACTT GTCTTTCAGC AAGGACTGGT CTTTCTATCT CTTGTACTAC ACTGAATTCA CCCCCACTGA AAAAGATGAG TATGCCTGCC GTGTGAACCA TGTGACTTTG TCACAGCCCA AGATAGTTAA GTGGGATCGA GACATGTAAG CAGCATCATG GAGGTTTGAA GATGCCGCAT TTGGATTGGA TGAATTCCAA ATTCTGCTTG CTTGC
MNR, homologue to genomic MNR region.
Transcripts#ENSTtranscribedtranslatedATGSTOPlengthMNRENSPlocate
1ENST0000055840111714311715342ENSP00000452780show
2ENST0000055972011614301220332ENSP00000453023show
3ENST000005614241139399604310ENSP00000453191show
4ENST0000055991611353951081306ENSP00000453350show
5ENST000003492641131205732169ENSP00000340858show
6ENST000005579011029185407289ENSP00000452861show
7ENST00000559907100499299--
8ENST00000560681100572267--
9ENST0000055922000580--
10ENST00000561139111217717128ENSP00000453186show
11ENST0000056055600472--
12ENST00000560113002329--
13ENST0000054441711314001027302ENSP00000437604show
14ENST000003967541126332433297ENSP00000379978show
Shown are all Ensembl transcripts (ENSTs) currently annotated for the respective Ensembl gene (ENSG), Ensembl rel. 66_37.
final status: cMNR (cMNR) .

Culture data cell line   mutated   allele(s)  reference
DLD1 0 - BICKNELL1994
HCA7 0 - BICKNELL1994
HCT116 0 - BICKNELL1994
HCT15 0 - BICKNELL1994
LoVo 0 - BICKNELL1994
LS174T 0 - BICKNELL1994
LS411 0 - BICKNELL1994
SW1122 0 - BICKNELL1994
SW48 0 - BICKNELL1994
VaCo5 0 - BICKNELL1994

Show consequences concerning peptide sequence(s) of frameshift alleles m2/m1/p1/p2.


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