previous  nextAB021288.A5.294 (B2M) -> ENSG00000166710@66_37.A5.45007834
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Tract / statusA5 / cMNR -> Tx!   MNR_ensembl
First published byBICKNELL1994 PubMed
Accession numberAB021288 gi:4038732
Gene (chromosome)B2M  ( 15 )   SOURCE
EnsemblENSG00000166710   SMART   GermOnline   GeneCards
NCBIEntrez Gene 567   Unigene Hs.534255 (SAGE)   GeneCards 567 

Mutation rate [%] Colon Endometrium Stomach Urothel
Cancer Adenoma Culture Cancer Cancer Cancer
6.70.021.2
(n=194)(n=10)(n=52)

Genomic sequence
BLAST WWW
BLAST local
ATTGCTATGT GTCTGGGTTT CATCCATCCG ACATTGAAGT TGACTTACTG AAGAATGGAG AGAGAATTGA AAAAGTGGAG CATTCAGACT TGTCTTTCAG CAAGGACTGG TCTTTCTATC TCTTGTACTA CACTGAATTC ACCCCCACTG AAAAAGATGA GTATGCCTGC CGTGTGAACC ATGTGACTTT GTCACAGCCC AAGATAGTTA AGTGGGGTAA GTCTTACATT CTTTTGTAAG CTGCTGAAAG TTGTGTATGA GTAGTCATAT CATAAAGCTG CTTTGATATA AAAAAGGTCT ATGGC
MNR, transcribed, primer.
Transcript sequenceATTGCTATGT GTCTGGGTTT CATCCATCCG ACATTGAAGT TGACTTACTG AAGAATGGAG AGAGAATTGA AAAAGTGGAG CATTCAGACT TGTCTTTCAG CAAGGACTGG TCTTTCTATC TCTTGTACTA CACTGAATTC ACCCCCACTG AAAAAGATGA GTATGCCTGC CGTGTGAACC ATGTGACTTT GTCACAGCCC AAGATAGTTA AGTGGGATCG AGACATGTAA GCAGCATCAT GGAGGTTTGA AGATGCCGCA TTTGGATTGG ATGAATTCCA AATTCTGCTT GCTTGCTTTT TAATA
MNR, homologue to genomic MNR region.
Transcripts#ENSTtranscribedtranslatedATGSTOPlengthMNRENSPlocate
1ENST0000055840111714311715351ENSP00000452780show
2ENST0000055972011614301220341ENSP00000453023show
3ENST000005614241139399604319ENSP00000453191show
4ENST0000055991611353951081315ENSP00000453350show
5ENST000003492641131205732178ENSP00000340858show
6ENST000005579011029185407298ENSP00000452861show
7ENST00000559907100499308--
8ENST00000560681100572276--
9ENST0000055922000580--
10ENST00000561139111217717137ENSP00000453186show
11ENST0000056055600472--
12ENST00000560113002329--
13ENST0000054441711314001027311ENSP00000437604show
14ENST000003967540026332433ENSP00000379978show
Shown are all Ensembl transcripts (ENSTs) currently annotated for the respective Ensembl gene (ENSG), Ensembl rel. 66_37.
final status: cMNR (cMNR) .

Culture data cell line   mutated   allele(s)  reference
DLD1 0 - BICKNELL1994
HCA7 0 - BICKNELL1994
HCT116 0 - BICKNELL1994
HCT15 0 - BICKNELL1994
LoVo 0 - BICKNELL1994
LS174T 0 - BICKNELL1994
LS411 0 - BICKNELL1994
SW1122 0 - BICKNELL1994
SW48 0 - BICKNELL1994
VaCo5 0 - BICKNELL1994

Show consequences concerning peptide sequence(s) of frameshift alleles m2/m1/p1/p2.


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