previous  nextAB021288.A5.213 (B2M) -> ENSG00000166710@66_37.A5.45007753
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Tract / statusA5 / cMNR -> Tx!   MNR_ensembl
First published byBICKNELL1994 PubMed
Accession numberAB021288 gi:4038732
Gene (chromosome)B2M  ( 15 )   SOURCE
EnsemblENSG00000166710   SMART   GermOnline   GeneCards
NCBIEntrez Gene 567   Unigene Hs.534255 (SAGE)   GeneCards 567 

Mutation rate [%] Colon Endometrium Stomach Urothel
Cancer Adenoma Culture Cancer Cancer Cancer
10.310.011.5
(n=194)(n=10)(n=52)

Genomic sequence
BLAST WWW
BLAST local
TTTCCCGATA TTCCTCAGGT ACTCCAAAGA TTCAGGTTTA CTCACGTCAT CCAGCAGAGA ATGGAAAGTC AAATTTCCTG AATTGCTATG TGTCTGGGTT TCATCCATCC GACATTGAAG TTGACTTACT GAAGAATGGA GAGAGAATTG AAAAAGTGGA GCATTCAGAC TTGTCTTTCA GCAAGGACTG GTCTTTCTAT CTCTTGTACT ACACTGAATT CACCCCCACT GAAAAAGATG AGTATGCCTG CCGTGTGAAC CATGTGACTT TGTCACAGCC CAAGATAGTT AAGTGGGGTA AGTCT
MNR, transcribed, primer.
Transcript sequenceGCCTGGAGGC TATCCAGCGT ACTCCAAAGA TTCAGGTTTA CTCACGTCAT CCAGCAGAGA ATGGAAAGTC AAATTTCCTG AATTGCTATG TGTCTGGGTT TCATCCATCC GACATTGAAG TTGACTTACT GAAGAATGGA GAGAGAATTG AAAAAGTGGA GCATTCAGAC TTGTCTTTCA GCAAGGACTG GTCTTTCTAT CTCTTGTACT ACACTGAATT CACCCCCACT GAAAAAGATG AGTATGCCTG CCGTGTGAAC CATGTGACTT TGTCACAGCC CAAGATAGTT AAGTGGGATC GAGAC
MNR, homologue to genomic MNR region.
Transcripts#ENSTtranscribedtranslatedATGSTOPlengthMNRENSPlocate
1ENST0000055840111714311715270ENSP00000452780show
2ENST0000055972011614301220260ENSP00000453023show
3ENST000005614241139399604238ENSP00000453191show
4ENST0000055991611353951081234ENSP00000453350show
5ENST00000349264113120573297ENSP00000340858show
6ENST000005579011029185407217ENSP00000452861show
7ENST00000559907100499227--
8ENST00000560681100572195--
9ENST0000055922000580--
10ENST0000056113911121771756ENSP00000453186show
11ENST0000056055600472--
12ENST00000560113002329--
13ENST0000054441711314001027230ENSP00000437604show
14ENST000003967541126332433225ENSP00000379978show
Shown are all Ensembl transcripts (ENSTs) currently annotated for the respective Ensembl gene (ENSG), Ensembl rel. 66_37.
final status: cMNR (cMNR) .

Culture data cell line   mutated   allele(s)  reference
DLD1 0 - BICKNELL1994
HCA7 0 - BICKNELL1994
HCT116 0 - BICKNELL1994
HCT15 0 - BICKNELL1994
LoVo 0 - BICKNELL1994
LS174T 0 - BICKNELL1994
LS411 0 - BICKNELL1994
SW1122 0 - BICKNELL1994
SW48 1 - BICKNELL1994
VaCo5 0 - BICKNELL1994

Show consequences concerning peptide sequence(s) of frameshift alleles m2/m1/p1/p2.


SelTarbase version latest, release 201307, last updated 20130701.

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